Uses of Class
org.opencb.cellbase.core.CellBaseDataResponse

Packages that use CellBaseDataResponse

Package	Description
org.opencb.cellbase.client.rest
org.opencb.cellbase.core
org.opencb.cellbase.server.rest

Uses of CellBaseDataResponse in org.opencb.cellbase.client.rest

Methods in org.opencb.cellbase.client.rest that return CellBaseDataResponse

Modifier and Type	Method and Description
CellBaseDataResponse<org.opencb.commons.datastore.core.ObjectMap>	MetaClient.about()
CellBaseDataResponse<String>	ClinicalVariantClient.alleleOriginLabels()
CellBaseDataResponse<org.opencb.biodata.models.variant.Variant>	VariantClient.annotate(List<org.opencb.biodata.models.variant.Variant> variants, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<org.opencb.biodata.models.variant.Variant>	VariantClient.annotate(List<org.opencb.biodata.models.variant.Variant> variants, org.opencb.commons.datastore.core.QueryOptions options, boolean post)
CellBaseDataResponse<String>	ClinicalVariantClient.clinsigLabels()
CellBaseDataResponse<String>	ClinicalVariantClient.consistencyLabels()
CellBaseDataResponse<Long>	ParentRestClient.count(org.opencb.commons.datastore.core.Query query)
protected <U> CellBaseDataResponse<U>	ParentRestClient.execute(List<String> idList, String resource, org.opencb.commons.datastore.core.QueryOptions options, Class<U> clazz)
protected <U> CellBaseDataResponse<U>	ParentRestClient.execute(List<String> idList, String resource, org.opencb.commons.datastore.core.QueryOptions options, Class<U> clazz, boolean post)
protected <U> CellBaseDataResponse<U>	ParentRestClient.execute(String action, org.opencb.commons.datastore.core.Query query, org.opencb.commons.datastore.core.QueryOptions queryOptions, Class<U> clazz)
protected <U> CellBaseDataResponse<U>	ParentRestClient.execute(String action, org.opencb.commons.datastore.core.Query query, org.opencb.commons.datastore.core.QueryOptions queryOptions, Class<U> clazz, boolean post)
protected <U> CellBaseDataResponse<U>	ParentRestClient.execute(String ids, String resource, org.opencb.commons.datastore.core.QueryOptions queryOptions, Class<U> clazz)
protected <U> CellBaseDataResponse<U>	ParentRestClient.execute(String ids, String resource, org.opencb.commons.datastore.core.QueryOptions queryOptions, Class<U> clazz, boolean post)
CellBaseDataResponse<T>	ParentRestClient.first()
CellBaseDataResponse<T>	ParentRestClient.get(List<String> id, org.opencb.commons.datastore.core.QueryOptions queryOptions)
<T> CellBaseDataResponse<T>	GenericClient.get(String category, String resource, org.opencb.commons.datastore.core.QueryOptions queryOptions, Class<T> clazz)
<T> CellBaseDataResponse<T>	GenericClient.get(String category, String subcategory, String ids, String resource, org.opencb.commons.datastore.core.QueryOptions queryOptions, Class<T> clazz)
CellBaseDataResponse<String>	VariationClient.getAllConsequenceTypes(org.opencb.commons.datastore.core.Query query)
CellBaseDataResponse<org.opencb.biodata.models.variant.avro.VariantAnnotation>	VariantClient.getAnnotation(List<org.opencb.biodata.models.variant.Variant> variants, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<org.opencb.biodata.models.variant.avro.VariantAnnotation>	VariantClient.getAnnotation(List<org.opencb.biodata.models.variant.Variant> variants, org.opencb.commons.datastore.core.QueryOptions options, boolean post)
CellBaseDataResponse<org.opencb.biodata.models.variant.avro.VariantAnnotation>	VariantClient.getAnnotationByVariantIds(List<String> ids, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<org.opencb.biodata.models.variant.avro.VariantAnnotation>	VariantClient.getAnnotationByVariantIds(List<String> ids, org.opencb.commons.datastore.core.QueryOptions options, boolean post)
CellBaseDataResponse<org.opencb.biodata.models.variant.avro.VariantAnnotation>	VariantClient.getAnnotationByVariantIds(String id, org.opencb.commons.datastore.core.QueryOptions options) Deprecated.
CellBaseDataResponse<org.opencb.biodata.models.variant.avro.VariantAnnotation>	VariantClient.getAnnotationByVariantIds(String id, org.opencb.commons.datastore.core.QueryOptions options, boolean post) Deprecated.
CellBaseDataResponse<String>	GeneClient.getBiotypes(org.opencb.commons.datastore.core.Query query)
CellBaseDataResponse<String>	VariationClient.getConsequenceTypeById(String id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<org.opencb.biodata.models.core.GenomicScoreRegion>	GenomicRegionClient.getConservation(List<String> id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<org.opencb.biodata.models.core.Gene>	GenomicRegionClient.getGene(List<String> id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<org.opencb.biodata.models.core.Gene>	TranscriptClient.getGene(String id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<String>	VariationClient.getPhenotype(String id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<String>	VariationClient.getPopulationFrequency(String id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<org.opencb.biodata.formats.protein.uniprot.v201504jaxb.Entry>	GeneClient.getProtein(String id, org.opencb.commons.datastore.core.QueryOptions queryOptions)
CellBaseDataResponse<org.opencb.biodata.formats.protein.uniprot.v201504jaxb.Entry>	TranscriptClient.getProtein(String id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<List>	TranscriptClient.getProteinFunctionPrediction(String id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<org.opencb.biodata.models.core.RegulatoryFeature>	GenomicRegionClient.getRegulatory(List<String> id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<org.opencb.biodata.models.core.RegulatoryFeature>	VariationClient.getRegulatory(String id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<org.opencb.biodata.models.variant.avro.Repeat>	GenomicRegionClient.getRepeat(List<String> id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<org.opencb.biodata.models.core.GenomeSequenceFeature>	GenomicRegionClient.getSequence(List<String> id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<String>	ProteinClient.getSequence(String id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<String>	VariationClient.getSequence(String id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<String>	TranscriptClient.getSequence(String id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<List>	ProteinClient.getSubstitutionScores(String id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<org.opencb.biodata.models.core.RegulatoryFeature>	GenomicRegionClient.getTfbs(List<String> id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<org.opencb.biodata.models.core.TranscriptTfbs>	GeneClient.getTfbs(String id, org.opencb.commons.datastore.core.QueryOptions queryOptions)
CellBaseDataResponse<org.opencb.biodata.models.core.Transcript>	GenomicRegionClient.getTranscript(List<String> id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<org.opencb.biodata.models.core.Transcript>	GeneClient.getTranscript(String id, org.opencb.commons.datastore.core.QueryOptions queryOptions)
CellBaseDataResponse<org.opencb.biodata.models.variant.Variant>	GenomicRegionClient.getVariation(List<String> id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<org.opencb.biodata.models.variant.Variant>	GeneClient.getVariation(List<String> id, org.opencb.commons.datastore.core.QueryOptions queryOptions)
CellBaseDataResponse<org.opencb.biodata.models.variant.Variant>	TranscriptClient.getVariation(String id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<org.opencb.biodata.models.core.Xref>	VariationClient.getXref(String id, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResponse<GroupByFields>	FeatureClient.group(org.opencb.commons.datastore.core.Query query, org.opencb.commons.datastore.core.QueryOptions queryOptions)
CellBaseDataResponse<GroupCount>	FeatureClient.groupCount(org.opencb.commons.datastore.core.Query query, org.opencb.commons.datastore.core.QueryOptions queryOptions)
CellBaseDataResponse<org.opencb.biodata.models.core.Gene>	GeneClient.list(org.opencb.commons.datastore.core.Query query) Deprecated.
CellBaseDataResponse<String>	ClinicalVariantClient.modeInheritanceLabels()
CellBaseDataResponse<T>	FeatureClient.next(String id)
CellBaseDataResponse<org.opencb.biodata.models.variant.Variant>	ClinicalVariantClient.search(org.opencb.commons.datastore.core.Query query, org.opencb.commons.datastore.core.QueryOptions queryOptions)
CellBaseDataResponse<T>	FeatureClient.search(org.opencb.commons.datastore.core.Query query, org.opencb.commons.datastore.core.QueryOptions queryOptions)
CellBaseDataResponse<SpeciesProperties>	MetaClient.species()
CellBaseDataResponse<SpeciesProperties>	MetaClient.species(String species)
CellBaseDataResponse<String>	ClinicalVariantClient.variantTypes()
CellBaseDataResponse<org.opencb.commons.datastore.core.ObjectMap>	MetaClient.versions()
CellBaseDataResponse<org.opencb.commons.datastore.core.ObjectMap>	MetaClient.versions(String species)

Uses of CellBaseDataResponse in org.opencb.cellbase.core

Methods in org.opencb.cellbase.core that return CellBaseDataResponse

Modifier and Type	Method and Description
CellBaseDataResponse<T>	CellBaseDataResponse.setApiVersion(String apiVersion)
CellBaseDataResponse<T>	CellBaseDataResponse.setParams(org.opencb.commons.datastore.core.ObjectMap params)
CellBaseDataResponse<T>	CellBaseDataResponse.setResponses(List<CellBaseDataResult<T>> responses)
CellBaseDataResponse<T>	CellBaseDataResponse.setTime(int time)

Uses of CellBaseDataResponse in org.opencb.cellbase.server.rest

Methods in org.opencb.cellbase.server.rest with parameters of type CellBaseDataResponse

Modifier and Type	Method and Description
protected javax.ws.rs.core.Response	GenericRestWSServer.createJsonResponse(CellBaseDataResponse queryResponse)