public class TranscriptClient extends ParentRestClient<org.opencb.biodata.models.core.Transcript>
assembly, category, clazz, client, configuration, DEFAULT_NUM_THREADS, EMPTY_STRING, jsonObjectMapper, LIMIT, logger, META, REST, REST_CALL_BATCH_SIZE, species, subcategory, WEBSERVICES
Constructor and Description |
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TranscriptClient(String species,
String assembly,
ClientConfiguration configuration) |
Modifier and Type | Method and Description |
---|---|
CellBaseDataResponse<org.opencb.biodata.models.core.Gene> |
getGene(String id,
org.opencb.commons.datastore.core.QueryOptions options) |
CellBaseDataResponse<org.opencb.biodata.formats.protein.uniprot.v201504jaxb.Entry> |
getProtein(String id,
org.opencb.commons.datastore.core.QueryOptions options) |
CellBaseDataResponse<List> |
getProteinFunctionPrediction(String id,
org.opencb.commons.datastore.core.QueryOptions options) |
CellBaseDataResponse<String> |
getSequence(String id,
org.opencb.commons.datastore.core.QueryOptions options) |
CellBaseDataResponse<org.opencb.biodata.models.variant.Variant> |
getVariation(String id,
org.opencb.commons.datastore.core.QueryOptions options) |
public TranscriptClient(String species, String assembly, ClientConfiguration configuration)
public CellBaseDataResponse<org.opencb.biodata.models.core.Gene> getGene(String id, org.opencb.commons.datastore.core.QueryOptions options) throws IOException
IOException
public CellBaseDataResponse<org.opencb.biodata.models.variant.Variant> getVariation(String id, org.opencb.commons.datastore.core.QueryOptions options) throws IOException
IOException
public CellBaseDataResponse<String> getSequence(String id, org.opencb.commons.datastore.core.QueryOptions options) throws IOException
IOException
public CellBaseDataResponse<org.opencb.biodata.formats.protein.uniprot.v201504jaxb.Entry> getProtein(String id, org.opencb.commons.datastore.core.QueryOptions options) throws IOException
IOException
public CellBaseDataResponse<List> getProteinFunctionPrediction(String id, org.opencb.commons.datastore.core.QueryOptions options) throws IOException
IOException
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