org.opencb.cellbase.core.variant.annotation

Interface VariantAnnotator

All Known Implementing Classes:

CellBaseLocalVariantAnnotator, CellBaseWSVariantAnnotator, PopulationFrequenciesAnnotator, VcfVariantAnnotator

public interface VariantAnnotator

Created by fjlopez on 28/04/15.

Field Summary

Fields

Modifier and Type	Field and Description
static String	IGNORE_PHASE

Method Summary

Modifier and Type	Method and Description
boolean	close()
boolean	open()
void	run(List<org.opencb.biodata.models.variant.Variant> variantList)

Field Detail

IGNORE_PHASE

static final String IGNORE_PHASE

See Also:

Constant Field Values

Method Detail

open

boolean open()

run

void run(List<org.opencb.biodata.models.variant.Variant> variantList)
  throws InterruptedException,
         ExecutionException

Throws:

InterruptedException

ExecutionException

close

boolean close()