public interface FeatureDBAdaptor<T> extends CellBaseDBAdaptor<T>
Modifier and Type | Field and Description |
---|---|
static String |
MERGE |
static String |
REGION |
Modifier and Type | Method and Description |
---|---|
default CellBaseDataResult |
first() |
default CellBaseDataResult |
first(org.opencb.commons.datastore.core.QueryOptions options) |
default List<CellBaseDataResult<T>> |
getByRegion(List<org.opencb.biodata.models.core.Region> regions,
org.opencb.commons.datastore.core.QueryOptions options) |
default CellBaseDataResult<T> |
getByRegion(org.opencb.biodata.models.core.Region region,
org.opencb.commons.datastore.core.QueryOptions options) |
default List<CellBaseDataResult<T>> |
getByVariant(List<org.opencb.biodata.models.variant.Variant> variants,
org.opencb.commons.datastore.core.QueryOptions options) |
default CellBaseDataResult<T> |
getByVariant(org.opencb.biodata.models.variant.Variant variant,
org.opencb.commons.datastore.core.QueryOptions options) |
default List<CellBaseDataResult> |
getIntervalFrequencies(List<org.opencb.commons.datastore.core.Query> queries,
int intervalSize,
org.opencb.commons.datastore.core.QueryOptions options) |
CellBaseDataResult |
getIntervalFrequencies(org.opencb.commons.datastore.core.Query query,
int intervalSize,
org.opencb.commons.datastore.core.QueryOptions options) |
CellBaseDataResult |
nativeNext(org.opencb.commons.datastore.core.Query query,
org.opencb.commons.datastore.core.QueryOptions options) |
CellBaseDataResult<T> |
next(org.opencb.commons.datastore.core.Query query,
org.opencb.commons.datastore.core.QueryOptions options) |
count, count, distinct, distinct, forEach, forEach, get, get, groupBy, groupBy, iterator, iterator, nativeGet, nativeGet, nativeIterator, nativeIterator, rank, stats, stats, update
spliterator
static final String MERGE
static final String REGION
default CellBaseDataResult first()
default CellBaseDataResult first(org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResult<T> next(org.opencb.commons.datastore.core.Query query, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResult nativeNext(org.opencb.commons.datastore.core.Query query, org.opencb.commons.datastore.core.QueryOptions options)
default CellBaseDataResult<T> getByRegion(org.opencb.biodata.models.core.Region region, org.opencb.commons.datastore.core.QueryOptions options)
default List<CellBaseDataResult<T>> getByRegion(List<org.opencb.biodata.models.core.Region> regions, org.opencb.commons.datastore.core.QueryOptions options)
CellBaseDataResult getIntervalFrequencies(org.opencb.commons.datastore.core.Query query, int intervalSize, org.opencb.commons.datastore.core.QueryOptions options)
default List<CellBaseDataResult> getIntervalFrequencies(List<org.opencb.commons.datastore.core.Query> queries, int intervalSize, org.opencb.commons.datastore.core.QueryOptions options)
default CellBaseDataResult<T> getByVariant(org.opencb.biodata.models.variant.Variant variant, org.opencb.commons.datastore.core.QueryOptions options)
default List<CellBaseDataResult<T>> getByVariant(List<org.opencb.biodata.models.variant.Variant> variants, org.opencb.commons.datastore.core.QueryOptions options)
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