Package | Description |
---|---|
org.opencb.cellbase.core.config | |
org.opencb.cellbase.lib | |
org.opencb.cellbase.lib.download |
Modifier and Type | Method and Description |
---|---|
List<SpeciesConfiguration.Assembly> |
SpeciesConfiguration.getAssemblies() |
Modifier and Type | Method and Description |
---|---|
void |
SpeciesConfiguration.setAssemblies(List<SpeciesConfiguration.Assembly> assemblies) |
Constructor and Description |
---|
SpeciesConfiguration(String id,
String scientificName,
String commonName,
List<SpeciesConfiguration.Assembly> assemblies,
List<String> data,
List<SpeciesConfiguration.ShardConfig> shards) |
Modifier and Type | Method and Description |
---|---|
static SpeciesConfiguration.Assembly |
SpeciesUtils.getAssembly(SpeciesConfiguration speciesConfiguration,
String assemblyString)
Check given assembly is valid, case insensitve.
|
static SpeciesConfiguration.Assembly |
SpeciesUtils.getDefaultAssembly(SpeciesConfiguration speciesConfiguration)
Get the default assembly for species.
|
Constructor and Description |
---|
DownloadManager(CellBaseConfiguration configuration,
Path targetDirectory,
SpeciesConfiguration speciesConfiguration,
SpeciesConfiguration.Assembly assembly) |
Copyright © 2019. All rights reserved.