public class Cadd extends Object
| Modifier and Type | Class and Description |
|---|---|
class |
Cadd.CaddValues |
| Constructor and Description |
|---|
Cadd() |
Cadd(String alternate,
String reference,
String chromosome,
Integer start,
Integer end,
Float encExp,
Float encH3K27Ac,
Float encH3K4Me1,
Float encH3K4Me3,
Float encNucleo,
Integer encOCC,
Float encOCCombPVal,
Float encOCDNasePVal,
Float encOCFairePVal,
Float encOCpolIIPVal,
Float encOCctcfPVal,
Float encOCmycPVal,
Float encOCDNaseSig,
Float encOCFaireSig,
Float encOCpolIISig,
Float encOCctcfSig,
Float encOCmycSig) |
public Cadd(String alternate, String reference, String chromosome, Integer start, Integer end, Float encExp, Float encH3K27Ac, Float encH3K4Me1, Float encH3K4Me3, Float encNucleo, Integer encOCC, Float encOCCombPVal, Float encOCDNasePVal, Float encOCFairePVal, Float encOCpolIIPVal, Float encOCctcfPVal, Float encOCmycPVal, Float encOCDNaseSig, Float encOCFaireSig, Float encOCpolIISig, Float encOCctcfSig, Float encOCmycSig)
public Cadd()
public String getAlternate()
public void setAlternate(String alternate)
public String getReference()
public void setReference(String reference)
public String getChromosome()
public void setChromosome(String chromosome)
public Integer getStart()
public void setStart(Integer start)
public Integer getEnd()
public void setEnd(Integer end)
public Float getEncExp()
public void setEncExp(Float encExp)
public Float getEncH3K27Ac()
public void setEncH3K27Ac(Float encH3K27Ac)
public Float getEncH3K4Me1()
public void setEncH3K4Me1(Float encH3K4Me1)
public Float getEncH3K4Me3()
public void setEncH3K4Me3(Float encH3K4Me3)
public Float getEncNucleo()
public void setEncNucleo(Float encNucleo)
public Integer getEncOCC()
public void setEncOCC(Integer encOCC)
public Float getEncOCCombPVal()
public void setEncOCCombPVal(Float encOCCombPVal)
public Float getEncOCDNasePVal()
public void setEncOCDNasePVal(Float encOCDNasePVal)
public Float getEncOCFairePVal()
public void setEncOCFairePVal(Float encOCFairePVal)
public Float getEncOCpolIIPVal()
public void setEncOCpolIIPVal(Float encOCpolIIPVal)
public Float getEncOCctcfPVal()
public void setEncOCctcfPVal(Float encOCctcfPVal)
public Float getEncOCmycPVal()
public void setEncOCmycPVal(Float encOCmycPVal)
public Float getEncOCDNaseSig()
public void setEncOCDNaseSig(Float encOCDNaseSig)
public Float getEncOCFaireSig()
public void setEncOCFaireSig(Float encOCFaireSig)
public Float getEncOCpolIISig()
public void setEncOCpolIISig(Float encOCpolIISig)
public Float getEncOCctcfSig()
public void setEncOCctcfSig(Float encOCctcfSig)
public Float getEncOCmycSig()
public void setEncOCmycSig(Float encOCmycSig)
public List<Cadd.CaddValues> getCaddValues()
public void setCaddValues(List<Cadd.CaddValues> values)
public void addCaddValues(float cscore,
float phred,
String genomicFeature)
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