@Deprecated public class ClinVarParser extends CellBaseParser
Modifier and Type | Field and Description |
---|---|
static String |
EFO_ID
Deprecated.
|
static String |
EFO_NAME
Deprecated.
|
static String |
EFO_URL
Deprecated.
|
static String |
GRCH37_ASSEMBLY
Deprecated.
|
static String |
GRCH38_ASSEMBLY
Deprecated.
|
logger, serializer
Constructor and Description |
---|
ClinVarParser(Path clinvarXmlFile,
Path clinvarSummaryFile,
Path efosFile,
String assembly,
CellBaseSerializer serializer)
Deprecated.
|
Modifier and Type | Method and Description |
---|---|
void |
parse()
Deprecated.
|
disconnect
public static final String GRCH37_ASSEMBLY
public static final String GRCH38_ASSEMBLY
public static final String EFO_ID
public static final String EFO_NAME
public static final String EFO_URL
public ClinVarParser(Path clinvarXmlFile, Path clinvarSummaryFile, Path efosFile, String assembly, CellBaseSerializer serializer)
public void parse()
parse
in class CellBaseParser
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