public class Tfbs extends Object implements Serializable
Constructor and Description |
---|
Tfbs() |
Tfbs(int tfbsId,
Pwm pwm,
org.opencb.biodata.models.core.Transcript transcript,
RegulatoryRegion regulatoryRegion,
org.opencb.biodata.models.core.Gene gene,
String tfName,
String targetGeneName,
String chromosome,
int start,
int end,
String strand,
int relativeStart,
int relativeEnd,
double score,
String sequence,
String cellType,
String source) |
Modifier and Type | Method and Description |
---|---|
String |
getCellType() |
String |
getChromosome() |
int |
getEnd() |
org.opencb.biodata.models.core.Gene |
getGene() |
Pwm |
getPwm() |
RegulatoryRegion |
getRegulatoryRegion() |
int |
getRelativeEnd() |
int |
getRelativeStart() |
double |
getScore() |
String |
getSequence() |
String |
getSource() |
int |
getStart() |
String |
getStrand() |
String |
getTargetGeneName() |
int |
getTfbsId() |
String |
getTfName() |
org.opencb.biodata.models.core.Transcript |
getTranscript() |
void |
setCellType(String cellType) |
void |
setChromosome(String chromosome) |
void |
setEnd(int end) |
void |
setGene(org.opencb.biodata.models.core.Gene gene) |
void |
setPwm(Pwm pwm) |
void |
setRegulatoryRegion(RegulatoryRegion regulatoryRegion) |
void |
setRelativeEnd(int relativeEnd) |
void |
setRelativeStart(int relativeStart) |
void |
setScore(double score) |
void |
setSequence(String sequence) |
void |
setSource(String source) |
void |
setStart(int start) |
void |
setStrand(String strand) |
void |
setTargetGeneName(String targetGeneName) |
void |
setTfbsId(int tfbsId) |
void |
setTfName(String tfName) |
void |
setTranscript(org.opencb.biodata.models.core.Transcript transcript) |
public Tfbs()
public Tfbs(int tfbsId, Pwm pwm, org.opencb.biodata.models.core.Transcript transcript, RegulatoryRegion regulatoryRegion, org.opencb.biodata.models.core.Gene gene, String tfName, String targetGeneName, String chromosome, int start, int end, String strand, int relativeStart, int relativeEnd, double score, String sequence, String cellType, String source)
public int getTfbsId()
public void setTfbsId(int tfbsId)
public Pwm getPwm()
public void setPwm(Pwm pwm)
public org.opencb.biodata.models.core.Transcript getTranscript()
public void setTranscript(org.opencb.biodata.models.core.Transcript transcript)
public RegulatoryRegion getRegulatoryRegion()
public void setRegulatoryRegion(RegulatoryRegion regulatoryRegion)
public org.opencb.biodata.models.core.Gene getGene()
public void setGene(org.opencb.biodata.models.core.Gene gene)
public String getTfName()
public void setTfName(String tfName)
public String getTargetGeneName()
public void setTargetGeneName(String targetGeneName)
public String getChromosome()
public void setChromosome(String chromosome)
public int getStart()
public void setStart(int start)
public int getEnd()
public void setEnd(int end)
public String getStrand()
public void setStrand(String strand)
public int getRelativeStart()
public void setRelativeStart(int relativeStart)
public int getRelativeEnd()
public void setRelativeEnd(int relativeEnd)
public double getScore()
public void setScore(double score)
public String getSequence()
public void setSequence(String sequence)
public String getCellType()
public void setCellType(String cellType)
public String getSource()
public void setSource(String source)
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